Index

A

add_bounds() (empmap.fit_map.Map method) add_fit_bounds() (empmap.fit_map.FullMap method) add_fit_guess() (empmap.fit_map.FullMap method) add_fit_keyword() (empmap.fit_map.FullMap method) (empmap.fit_map.Map method)

add_initial_guess() (empmap.fit_map.Map method) add_map() (empmap.fit_map.FullMap method) add_prebuilt_map() (empmap.fit_map.FullMap method)

B

build_base_data() (empmap.collect_map_data.CollectMapData method)

build_from_map() (empmap.fit_map.Map class method)

C

calculate_fit_error() (empmap.fit_map.Map method) calculate_iso_pol() (empmap.potential.Potential1D method) calculate_r_squared() (empmap.fit_map.Map method)

calculate_reduced_mass() (empmap.sincdvr.DVR static method) calculate_rmse() (empmap.fit_map.Map method) CollectMapData (class in empmap.collect_map_data) ConstantsManagement (class in empmap.constants)

D

description() (empmap.emp_setup.MapSetup method) (empmap.gauss_logfile.GaussianLogFile method) (empmap.potential.Morse method) (empmap.sincdvr.DVR method)

display_hist2d_map() (empmap.fit_map.Map method) display_map() (empmap.fit_map.Map method) do_calculation() (empmap.sincdvr.DVR method) DVR (class in empmap.sincdvr)

E

empmap.collect_map_data module empmap.constants module empmap.emp_setup module empmap.fit_map module

empmap.gauss_logfile module empmap.poly_fit module empmap.potential module empmap.sincdvr module energy() (empmap.potential.Morse method)

F

fit_dipole_to_poly() (empmap.potential.Potential1D method) fit_map() (empmap.fit_map.FullMap method) fit_maps() (empmap.fit_map.FullMap method) fit_parameters() (empmap.potential.Morse method)

fit_polarizability_to_poly() (empmap.potential.Potential1D method) fit_potential_to_poly() (empmap.potential.Potential1D method) fit_to_morse() (empmap.potential.Potential1D method) fit_to_poly() (empmap.fit_map.Map method) FullMap (class in empmap.fit_map)

G

GaussianLogFile (class in empmap.gauss_logfile) get_fit() (empmap.fit_map.Map method) grab_clusters_from_frames() (empmap.emp_setup.MapSetup method)

grab_dipole() (empmap.gauss_logfile.GaussianLogFile method) grab_energies() (empmap.gauss_logfile.GaussianLogFile method) grab_for_empirical_mapping() (empmap.gauss_logfile.GaussianLogFile method) grab_tensor_from_gaussian() (empmap.gauss_logfile.GaussianLogFile method)

L

load_self() (empmap.collect_map_data.CollectMapData class method)

load_universe() (empmap.emp_setup.MapSetup method)

M

Map (class in empmap.fit_map) MapSetup (class in empmap.emp_setup) module empmap.collect_map_data empmap.constants empmap.emp_setup empmap.fit_map empmap.gauss_logfile empmap.poly_fit empmap.potential empmap.sincdvr

Morse (class in empmap.potential) morse_Bfactor() (empmap.potential.Morse method) morse_eigenvalues() (empmap.potential.Morse static method) mu_fit_selector() (in module empmap.poly_fit)

O

obtain_dvr() (empmap.collect_map_data.CollectMapData method)

P

poly_fit_selector() (in module empmap.poly_fit)

Potential1D (class in empmap.potential)

R

remove_fit_keyword() (empmap.fit_map.Map method) report_latex() (empmap.fit_map.Map method) report_latex_line() (empmap.fit_map.Map method)

report_latex_table() (empmap.fit_map.FullMap method) report_map() (empmap.fit_map.Map method) report_maps() (empmap.fit_map.FullMap method)

S

save_self() (empmap.collect_map_data.CollectMapData method)

set_attribute_by_type() (empmap.emp_setup.MapSetup method) set_attribute_from_list() (empmap.emp_setup.MapSetup method)

W

write_gaussian() (empmap.emp_setup.MapSetup method)

write_map_file() (empmap.fit_map.FullMap method) write_output_data() (empmap.emp_setup.MapSetup method)